CABS-dock: 24250f1b2119bb5

Project name: 24250f1b2119bb5

Status: done

submitted: 2026-04-20 01:45:01, status changed: 2026-04-20 08:34:47

Project settings

Protein sequence(s)	GEAPNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLMDEEDMDDVVDADEYLIP input pdb
Peptide sequence	EGIFGGFMLGVKSISGMAFS
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCEECCCEEEECCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	47.2866	2.2205	32.0784	105
cluster_2.pdb ( medoid)	18.4782	4.49179	23.229	83
cluster_3.pdb ( medoid)	14.1283	7.92735	28.9433	112
cluster_4.pdb ( medoid)	13.6638	10.5388	54.3449	144
cluster_5.pdb ( medoid)	10.7666	8.82362	28.4667	95
cluster_6.pdb ( medoid)	10.2474	9.85612	34.282	101
cluster_7.pdb ( medoid)	10.1468	5.61751	26.8891	57
cluster_8.pdb ( medoid)	8.99446	12.2297	37.0124	110
cluster_9.pdb ( medoid)	8.9801	14.9219	43.7016	134
cluster_10.pdb ( medoid)	2.25281	26.1895	57.4587	59