Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | GFPCGESCVFIPCISAAIGCSCKNKVCYRN |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCEEEECCCHHHHCCCCCCCEECCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 31.0557 | 3.22002 | 5.69775 | 100 |
cluster_2.pdb ( medoid) | 27.0749 | 2.8809 | 6.34065 | 78 |
cluster_3.pdb ( medoid) | 25.7902 | 5.3121 | 14.8121 | 137 |
cluster_4.pdb ( medoid) | 25.0981 | 5.0203 | 18.9763 | 126 |
cluster_5.pdb ( medoid) | 20.137 | 8.93879 | 28.0863 | 180 |
cluster_6.pdb ( medoid) | 9.66404 | 14.0728 | 30.3981 | 136 |
cluster_7.pdb ( medoid) | 8.7665 | 6.6161 | 14.6572 | 58 |
cluster_8.pdb ( medoid) | 7.15966 | 11.8721 | 26.9802 | 85 |
cluster_9.pdb ( medoid) | 3.78386 | 9.24981 | 16.8428 | 35 |
cluster_10.pdb ( medoid) | 3.70462 | 17.5457 | 33.8412 | 65 |