CABS-dock: 2c75ce77ae7e8b0

Project name: 2c75ce77ae7e8b0

Status: done

submitted: 2026-07-01 10:06:00, status changed: 2026-07-01 22:40:33

Project settings

Protein sequence(s)	MAQAPADPGREGHLEQRILQVLTEAGSPVKLAQLVKECQAPKRELNQVLYRMKKELKVSLTSPATWCLGGTDPEGEGPAELALSSPAERPQQHAATIPETPGPQFSQQREEDIYRFLKDNGPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMDEQSKAWTIYRPEDSGRRAKSASIIYQHNPINMICQNGPNSWISIANSEAIQIGHGNIITRQTVSREDGSAGPRHLPSMAPGDSSTWGTLVDPWGPQDIHMEQSILRRVQLGHSNEMRLHGVPSEGPAHIPPGSPPVSATAAGPEASFEARIPSPGTHPEGEAAQRIHMKSCFLEDATIGNSNKMSISPGVAGPGGVAGSGEGEPGEDAGRRPADTQSRSHFPRDIGQPITPSHSKLTPKLETMTLGNRSHKAAEGSHYVDEASHEGSWWGGGI input pdb
Peptide sequence	KRLVQVFGSNTYRLH
Simulation mc cycles	50
Peptide secondary structure psipred	CCCEEECCCCCEECC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	63.8373	1.56648	4.89814	100
cluster_2.pdb ( medoid)	30.9731	3.51919	29.7119	109
cluster_3.pdb ( medoid)	18.0493	3.65665	16.7071	66
cluster_4.pdb ( medoid)	15.7434	4.19223	9.46306	66
cluster_5.pdb ( medoid)	12.594	8.73432	20.4274	110
cluster_6.pdb ( medoid)	10.0701	7.54707	17.661	76
cluster_7.pdb ( medoid)	7.60269	5.12977	18.105	39
cluster_8.pdb ( medoid)	6.83378	9.07258	18.4425	62
cluster_9.pdb ( medoid)	5.28603	6.43205	14.0546	34
cluster_10.pdb ( medoid)	4.21779	9.00945	18.5725	38