CABS-dock: 2ea49c9a4a329aa

Project name: 2ea49c9a4a329aa

Status: done

submitted: 2025-12-15 08:56:06, status changed: 2025-12-15 13:52:01

Project settings

Protein sequence(s)	IIGGRESRPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGSNINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMRS input pdb
Peptide sequence	DDPK
Simulation mc cycles	50
Peptide secondary structure psipred	CCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	29.8969	7.35863	30.5468	220
cluster_2.pdb ( medoid)	28.608	3.88003	32.7556	111
cluster_3.pdb ( medoid)	22.537	7.58751	32.2164	171
cluster_4.pdb ( medoid)	11.0754	8.57753	26.7434	95
cluster_5.pdb ( medoid)	10.4761	6.87276	24.7985	72
cluster_6.pdb ( medoid)	9.53895	8.38667	27.4082	80
cluster_7.pdb ( medoid)	9.47983	8.12251	23.6577	77
cluster_8.pdb ( medoid)	5.856	13.1489	32.4194	77
cluster_9.pdb ( medoid)	5.74665	11.485	35.511	66
cluster_10.pdb ( medoid)	2.27872	13.6041	30.5657	31