CABS-dock: 32c333922821c29

Project name: 32c333922821c29

Status: done

submitted: 2026-01-23 11:58:14, status changed: 2026-01-23 21:46:53

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	GGTPDATGGGGGDTPSATGGGGGDT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCCCCCCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	14.0898	12.6333	53.6384	178
cluster_2.pdb ( medoid)	13.4904	9.19172	29.8589	124
cluster_3.pdb ( medoid)	11.8399	9.71289	33.5138	115
cluster_4.pdb ( medoid)	11.7284	14.0684	48.1857	165
cluster_5.pdb ( medoid)	9.57494	12.7416	45.8576	122
cluster_6.pdb ( medoid)	9.42132	10.0835	26.9864	95
cluster_7.pdb ( medoid)	3.64576	15.6346	36.4285	57
cluster_8.pdb ( medoid)	2.94366	18.3445	42.3427	54
cluster_9.pdb ( medoid)	2.4086	19.5134	40.7048	47
cluster_10.pdb ( medoid)	2.18152	16.9606	43.5045	37