CABS-dock: 3a7c7543ccf9fee

Project name: 3a7c7543ccf9fee

Status: done

submitted: 2026-01-12 16:23:11, status changed: 2026-01-13 05:33:03

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	MSIGITPRPQQTTTPLDFSALSGKS
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCHHHHCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	30.8889	3.39928	33.0522	105
cluster_2.pdb ( medoid)	16.9464	7.78928	24.3442	132
cluster_3.pdb ( medoid)	13.309	8.18996	38.5115	109
cluster_4.pdb ( medoid)	10.3359	13.3515	30.8568	138
cluster_5.pdb ( medoid)	6.50338	10.4561	28.6309	68
cluster_6.pdb ( medoid)	6.08837	16.2605	37.3398	99
cluster_7.pdb ( medoid)	5.82211	13.0537	27.763	76
cluster_8.pdb ( medoid)	5.16068	12.789	22.9286	66
cluster_9.pdb ( medoid)	4.00736	16.2202	36.3287	65
cluster_10.pdb ( medoid)	3.6479	11.5135	26.1135	42