CABS-dock: 7T5M_ANHPAA

Project name: 7T5M_ANHPAA_E2

Status: done

submitted: 2026-05-30 16:11:10, status changed: 2026-05-31 14:36:44

Project settings

Protein sequence(s)	GSSHSSMMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRRFDSDAASQRMEEPRAPWIEQEGPPEYWDGETRRKVKAHSQTHRVDLGTLLRGYYNQSEAGSHTVQRMYGCDVVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHHHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKKETLQRTTDAPKKTHMMTHHAVSDHEATLRCWALSFYPPAEITLTWQRDGEDDQTQDTELVETRPAGDGTFQKWAAVVVPSSSGQEQRYTCHVQHEGLPKPLTLRWEP input pdb
Peptide sequence	ANHPAATHTKAVALGTEE
Simulation mc cycles	200
Peptide secondary structure psipred	CCCCCCCCCCCHHCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	66.8484	1.6156	9.31087	108
cluster_2.pdb ( medoid)	37.4848	5.62895	52.991	211
cluster_3.pdb ( medoid)	25.7559	3.99909	11.1211	103
cluster_4.pdb ( medoid)	20.4384	5.96916	13.1893	122
cluster_5.pdb ( medoid)	14.8571	13.0577	51.7178	194
cluster_6.pdb ( medoid)	9.91712	7.0585	18.851	70
cluster_7.pdb ( medoid)	9.28156	4.74058	16.5482	44
cluster_8.pdb ( medoid)	5.79064	6.56232	14.7872	38
cluster_9.pdb ( medoid)	3.87464	16.5177	41.1521	64
cluster_10.pdb ( medoid)	1.88508	23.8717	58.2584	45