CABS-dock: 413e5c94d2b013f

Project name: 413e5c94d2b013f

Status: done

submitted: 2026-01-23 12:02:50, status changed: 2026-01-23 18:08:28

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	LITVKGEGGAAVTNLNIKNSSAKGA
Simulation mc cycles	50
Peptide secondary structure psipred	CEEEECCCCEEEEECEECCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	26.4082	3.9003	27.7583	103
cluster_2.pdb ( medoid)	14.9641	10.7591	33.2631	161
cluster_3.pdb ( medoid)	14.9369	5.48976	16.1782	82
cluster_4.pdb ( medoid)	11.4145	10.3377	26.0652	118
cluster_5.pdb ( medoid)	6.90298	9.27135	18.5309	64
cluster_6.pdb ( medoid)	6.71644	10.72	40.536	72
cluster_7.pdb ( medoid)	6.23551	9.94305	25.6716	62
cluster_8.pdb ( medoid)	6.14789	13.1753	27.5356	81
cluster_9.pdb ( medoid)	2.75616	13.0616	23.6158	36
cluster_10.pdb ( medoid)	1.0553	19.8996	36.3642	21