CABS-dock: 8TBP_KWTLQD

Project name: 8TBP_KWTLQD_E2

Status: done

submitted: 2026-05-30 16:16:58, status changed: 2026-05-31 07:27:21

Project settings

Protein sequence(s)	DTRPRFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAVDTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA input pdb
Peptide sequence	KWTLQDVSLEVYLTAP
Simulation mc cycles	200
Peptide secondary structure psipred	CCCCEEEEEEEEEECC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	30.6808	4.13939	13.9257	127
cluster_2.pdb ( medoid)	28.314	3.56715	22.5789	101
cluster_3.pdb ( medoid)	25.9032	5.21172	26.0287	135
cluster_4.pdb ( medoid)	25.7703	8.18771	21.9433	211
cluster_5.pdb ( medoid)	20.9791	4.86198	23.1138	102
cluster_6.pdb ( medoid)	16.4519	7.71946	27.3315	127
cluster_7.pdb ( medoid)	9.33516	5.46321	11.8904	51
cluster_8.pdb ( medoid)	8.75058	9.59936	20.8355	84
cluster_9.pdb ( medoid)	3.12404	11.8436	21.3998	37
cluster_10.pdb ( medoid)	2.35914	10.5971	24.7904	25