CABS-dock: 45383f84ece7295

Project name: 45383f84ece7295

Status: done

submitted: 2026-05-04 15:30:34, status changed: 2026-05-04 19:49:17

Project settings

Protein sequence(s)	HMVHITLDPDTANPWLILSEDRRQVRLGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFLLSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLIYSFSECAFTGPLRPFFSPGFNDGGKNTAPLTLCPL input pdb
Peptide sequence	EALHNHYT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	24.4649	4.08749	19.4501	100
cluster_2.pdb ( medoid)	24.2306	6.23179	32.3403	151
cluster_3.pdb ( medoid)	24.0564	4.36475	26.2486	105
cluster_4.pdb ( medoid)	21.2081	7.59145	33.9708	161
cluster_5.pdb ( medoid)	18.9165	5.81504	29.8117	110
cluster_6.pdb ( medoid)	13.0522	10.0366	35.2723	131
cluster_7.pdb ( medoid)	9.91115	7.36544	20.4873	73
cluster_8.pdb ( medoid)	9.21531	8.24714	18.7803	76
cluster_9.pdb ( medoid)	5.9056	11.5145	31.2651	68
cluster_10.pdb ( medoid)	5.58959	4.4726	10.4961	25