CABS-dock: 4649f9a4fcfd616

Project name: 4649f9a4fcfd616

Status: done

submitted: 2026-01-12 17:35:19, status changed: 2026-01-13 06:47:20

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	SGTGSVSDTAGSTEQAGKINVVKDT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCCCCEEEEECC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	33.2529	3.21777	19.6508	107
cluster_2.pdb ( medoid)	21.7493	5.5634	15.0503	121
cluster_3.pdb ( medoid)	15.3247	7.37373	34.1811	113
cluster_4.pdb ( medoid)	15.0296	7.25233	37.1868	109
cluster_5.pdb ( medoid)	11.1573	9.67975	21.1001	108
cluster_6.pdb ( medoid)	6.63787	10.5455	24.1925	70
cluster_7.pdb ( medoid)	5.24238	20.4106	50.7717	107
cluster_8.pdb ( medoid)	4.59179	13.5023	37.57	62
cluster_9.pdb ( medoid)	4.29311	15.6064	32.2863	67
cluster_10.pdb ( medoid)	3.17922	11.3235	26.6808	36