CABS-dock: 4d10bbf156d5e96

Project name: 4d10bbf156d5e96

Status: done

submitted: 2026-01-21 11:06:03, status changed: 2026-01-21 15:47:04

Project settings

Protein sequence(s)	GSLFQLKRETDDLEQWISSEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIIGQERVDNVNAFIERLLIDAGHSEAATTIAEWKDGLNEMWADLLLELIDDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTAFERELHLLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACA input pdb
Peptide sequence	RSLANDWQSSNLTGT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCHHHHHCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	31.8369	3.29805	23.1928	105
cluster_2.pdb ( medoid)	21.6532	4.34115	18.5021	94
cluster_3.pdb ( medoid)	20.4096	9.75032	32.1158	199
cluster_4.pdb ( medoid)	10.6738	11.3361	29.3896	121
cluster_5.pdb ( medoid)	9.27542	8.84057	27.4347	82
cluster_6.pdb ( medoid)	8.78232	14.1193	41.7706	124
cluster_7.pdb ( medoid)	8.56322	6.65638	30.9302	57
cluster_8.pdb ( medoid)	5.51567	22.3001	48.405	123
cluster_9.pdb ( medoid)	3.58032	14.2445	32.9613	51
cluster_10.pdb ( medoid)	1.90723	23.07	50.2914	44