CABS-dock: CABS_RhHXK1_CLE11P

Project name: CABS_RhHXK1_CLE11P_260112

Status: done

submitted: 2026-01-12 08:02:43, status changed: 2026-01-12 21:37:11

Project settings

Protein sequence(s)	WARAMAILKEFEDKCDTPIGKLRQVADAMTVEMHAGLASEGGSKLKMLISYVDNLPTGDEKGLFYALDLGGTNFRVLRVQLGGKEKRVIKQEFDEVSIPPHLMTGTSEGLFDFIAEALAKFVATEGEGFHPAPGRLRELGFTFSFPVWQTSIASGTLMKWTKGFSIEDAVDQDVVAELTKSVEKIGLDMRVTALVNDTIGTLAGGRYHNPDAIAAVILGTGTNAAYVERAHAIPKWHGLLPKSGEMVINMEWGNFRSSHLPLTEYDQALDAESLNPGDQIFEKIISGMYLGEIVRRVLLKMAEEAAFFGDTVPPKLKVPFILRTPDMSAMHHDSSLDLKIVGTKLKDILEISNTSLKVRKAVVALCDIVATRGARLSAAGILGVLKKLGRDTVKDGEKHKSVVAMDGGLFEHYTEFRVCMESTLYELLGDEVAEHISVEHSNDGSGIGAALLAASHSH input pdb
Peptide sequence	HEVPSGPNPISN
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	155.163	0.219124	0.6818	34
cluster_2.pdb ( medoid)	26.5631	2.63524	23.6587	70
cluster_3.pdb ( medoid)	25.0916	4.14481	32.4754	104
cluster_4.pdb ( medoid)	20.1761	5.05549	31.5714	102
cluster_5.pdb ( medoid)	18.8763	4.7149	28.7506	89
cluster_6.pdb ( medoid)	13.0752	11.0897	43.8758	145
cluster_7.pdb ( medoid)	12.4912	10.0071	37.1116	125
cluster_8.pdb ( medoid)	10.5437	11.8554	48.7233	125
cluster_9.pdb ( medoid)	8.37626	18.7434	55.9032	157
cluster_10.pdb ( medoid)	2.60219	18.8303	41.648	49