CABS-dock: 4f6d7439be46e76

Project name: 4f6d7439be46e76

Status: done

submitted: 2026-06-17 15:24:49, status changed: 2026-06-17 21:27:24

Project settings

Protein sequence(s)	ECVTQLLKDTCFEGGDITTVFTPSAKYCQVVCTYHPRCLLFTFTAESPSEDPTRWFTCVLKDSVTETLPRVNRTAAISGYSFKQCSHQISACNKDIYVDLDMKGINYNSSVAKSAQECQERCTDDVHCHFFTYATRQFPSLEHRNICLLKHTQTGTPTRITKLDKVVSGFSLKSCALSNLACIRDIFPNTVFADSNIDSVMAPDAFVCGRICTHHPGCLFFTFFSQEWPKESQRNLCLLKTSESGLPSTRIKKSKALSGFSLQSCRHSIPVFCHSSFYHDTDFLGEELDIVAAKSHEACQKLCTNAVRCQFFTYTPAQASCNEGKGKCYLKLSSNGSPTKILHGRGGISGY input pdb
Peptide sequence	TFDETVTA
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	26.2057	4.42652	31.7975	116
cluster_2.pdb ( medoid)	23.5069	5.18996	21.8041	122
cluster_3.pdb ( medoid)	19.2123	7.59929	39.1759	146
cluster_4.pdb ( medoid)	16.1	10.4348	48.0726	168
cluster_5.pdb ( medoid)	10.8416	7.74797	24.7477	84
cluster_6.pdb ( medoid)	10.5073	9.7075	31.033	102
cluster_7.pdb ( medoid)	9.78365	9.50565	33.3858	93
cluster_8.pdb ( medoid)	8.33313	9.36023	30.5614	78
cluster_9.pdb ( medoid)	4.65449	9.66808	26.2954	45
cluster_10.pdb ( medoid)	2.81912	16.3171	42.6615	46