CABS-dock: 5) A0A1J0CN82

Project name: 5) A0A1J0CN82

Status: done

submitted: 2026-01-14 04:52:19, status changed: 2026-01-14 10:39:47

Project settings

Protein sequence(s)	MSRIILFAAILAIIAVSANGASNLPALDMASIPDEYKDLVPPEVTTFYNELTEDDKKILKEVAEKHSEYATDEDALNALKEKSEKLYTKANELRNLVKDRISKLNPEAKTFVDTIIEKLKALRPKEDEKPNLTELRKEANEIVEKFKALSEEAKESLKTNFPKITGVIQNEKFQKLAQSLLKPEGAAAPA input pdb
Peptide sequence	MKKAVIVENKGCATCSIGAACLVDT
Simulation mc cycles	50
Peptide secondary structure psipred	CCEEEEEECCCCCCCCCCCEEEECC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	24.9502	4.52901	33.3079	113
cluster_2.pdb ( medoid)	20.3114	6.00648	35.0514	122
cluster_3.pdb ( medoid)	16.2232	5.42435	14.5655	88
cluster_4.pdb ( medoid)	15.6125	8.45476	31.5733	132
cluster_5.pdb ( medoid)	12.6787	8.43935	32.426	107
cluster_6.pdb ( medoid)	7.40152	9.45752	29.8041	70
cluster_7.pdb ( medoid)	7.07077	18.9513	39.3009	134
cluster_8.pdb ( medoid)	6.28394	6.52456	14.8278	41
cluster_9.pdb ( medoid)	5.91233	15.3916	33.6217	91
cluster_10.pdb ( medoid)	5.54076	18.409	38.1186	102