Project name: Ligand 3

Status: running

submitted: 2026-01-20 12:07:16, status changed: 2026-01-20 12:15:54
Project settings
Protein sequence(s) HKSEVAHRFKDLGEENFKALVLIAFAQYLQQCPFEDHVKLVNEVTEFAKTVADESAENDKSLHTLFGDKLTVATLRETYGEMADAKQEPERNEFLQHKDDNPNLPRLVRPEVDVMTAFHDNEETFLKKYLYEIARRHPYFYAPELLFFAKRYKAAFTEQAADKAALLPKLDELRDEGKASSAKQRLKASLQKFGERAFKAWAVARLSQRFPKAEFAEVSKLVTDLTKVHTEHGDLLEADDRADLAKYIENQDSISSKLKEEKPLLEKSHIAEVENDEMPADLPSLAADFVESKDVKNYAEAKDVFLGMFLYEYARRHPDYSVVLLLRLAKTYETTLEKAAADPHEYAKVFDEFKPLVEEPQNLIKQNELFEQLGEYKFQNALLVRYTKKVPQVSTPTLVEVSRNLGKVGSKKHPEAKRMPAEDYLSVVLNQLVLHEKTPVSDRVTKTESLVNRRPFSALEVDETYVPKEFNAETFTFHADITLSEKERQIKKQTALVELVKHKPKATKEQLKAVMDDFAAFVEKKADDKETFAEEGK input pdb
Peptide sequence RRRCKKSIPPICF
Simulation mc cycles50
Peptide secondary structure psipred CCCCCCCCCCCCC
Contact information
4 12 S-S 2.05
1 13 BB 1.33
Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
 
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Representative conformations

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Laboratory of Computational Biology, 2020