CABS-dock: FcGR1-7

Project name: FcGR1-7

Status: done

submitted: 2026-07-09 02:26:33, status changed: 2026-07-09 07:31:05

Project settings

Protein sequence(s)	KAVIKLQPPWVSSVFQEESVTLHCEVPGSSSTQWFLNGTAIQTSTPTYHITSASEDDSGEYRCQRGLSGRSDPIQLEVHRGWLLLQVSSRVLTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFHWNSNLTILKTNMSHSGTYHCSGMMGKHRYTSAGISVTVKELFPAPVLTASVTSPLLEGTPVTLSCETKLLLQRPGLQLYFSFYMMGSKTLRGRDTSSEYQILTARRREDSGLYWCEAATEDGNVLKRSPELELQVLG input pdb
Peptide sequence	TEDELAQYDYDYDLAT
Simulation mc cycles	50
Peptide secondary structure psipred	CHHHHHHHCCCCCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	34.7941	3.13272	18.935	109
cluster_2.pdb ( medoid)	26.0506	5.41255	22.7206	141
cluster_3.pdb ( medoid)	21.0549	4.79699	25.0275	101
cluster_4.pdb ( medoid)	20.8869	7.51666	22.7446	157
cluster_5.pdb ( medoid)	20.2253	7.81198	19.4432	158
cluster_6.pdb ( medoid)	11.7898	7.6337	18.5868	90
cluster_7.pdb ( medoid)	10.8714	7.91063	19.912	86
cluster_8.pdb ( medoid)	7.52251	8.5078	22.8809	64
cluster_9.pdb ( medoid)	4.41478	11.3256	31.3891	50
cluster_10.pdb ( medoid)	3.80993	11.5488	25.0693	44