CABS-dock: 6109c45f7799246

Project name: 6109c45f7799246

Status: done

submitted: 2026-04-14 21:43:11, status changed: 2026-04-15 06:43:48

Project settings

Protein sequence(s)	EEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDDTRPRFLQQDKYECHFFNGTERVRFLHRDIYNQEEDLRFDSDVGEYRAVTELGRPDAEYWNSQKDFLEDRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPAHNLLVCSVNGFYPGSIEVRWFRNSQEEKAGVVSTGLIQNGDWTFQTLVMLETVPREVYTCQVEHPSVTSPLTVEWRA input pdb
Peptide sequence	ASTLAPFPTYPIVVG
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	50.4528	2.04151	5.56748	103
cluster_2.pdb ( medoid)	47.2052	2.18196	10.1851	103
cluster_3.pdb ( medoid)	29.5209	3.76005	9.71639	111
cluster_4.pdb ( medoid)	25.0762	5.02468	9.30254	126
cluster_5.pdb ( medoid)	24.0062	3.45743	5.82043	83
cluster_6.pdb ( medoid)	15.2983	4.83714	8.5364	74
cluster_7.pdb ( medoid)	11.8308	10.7347	32.8127	127
cluster_8.pdb ( medoid)	11.7394	9.37012	36.9004	110
cluster_9.pdb ( medoid)	6.001	17.4971	39.6801	105
cluster_10.pdb ( medoid)	5.43887	10.664	22.6292	58