Protein sequence(s) | APYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPEL input pdb |
Peptide sequence | TWSGGM |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 58.742 | 3.0983 | 13.8118 | 182 |
cluster_2.pdb ( medoid) | 38.7944 | 4.63984 | 24.2064 | 180 |
cluster_3.pdb ( medoid) | 32.8657 | 4.99001 | 16.1065 | 164 |
cluster_4.pdb ( medoid) | 15.9857 | 5.37979 | 14.8394 | 86 |
cluster_5.pdb ( medoid) | 11.5942 | 5.95127 | 13.2428 | 69 |
cluster_6.pdb ( medoid) | 10.4761 | 8.49554 | 20.4311 | 89 |
cluster_7.pdb ( medoid) | 9.6318 | 5.9179 | 19.7151 | 57 |
cluster_8.pdb ( medoid) | 9.13702 | 8.09892 | 17.8777 | 74 |
cluster_9.pdb ( medoid) | 6.92428 | 8.66517 | 21.9799 | 60 |
cluster_10.pdb ( medoid) | 5.44502 | 7.1625 | 15.1908 | 39 |