CABS-dock: 64a6efabd317390

Project name: 64a6efabd317390

Status: done

submitted: 2026-01-22 13:07:36, status changed: 2026-01-22 16:48:42

Project settings

Protein sequence(s)	GSLFQLKRETDDLEQWISSEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIIGQERVDNVNAFIERLLIDAGHSEAATTIAEWKDGLNEMWADLLLELIDDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTAFERELHLLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACA input pdb
Peptide sequence	ATFDKNDEDSPIVMHQEDGST
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCEEECCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	25.1521	7.23599	28.1332	182
cluster_2.pdb ( medoid)	23.5361	5.39598	39.8808	127
cluster_3.pdb ( medoid)	22.8708	4.89707	39.4069	112
cluster_4.pdb ( medoid)	17.2697	6.19583	17.3052	107
cluster_5.pdb ( medoid)	11.8417	7.00915	19.678	83
cluster_6.pdb ( medoid)	10.46	12.7151	36.0156	133
cluster_7.pdb ( medoid)	9.87003	7.09218	27.9751	70
cluster_8.pdb ( medoid)	9.83193	8.13675	23.8162	80
cluster_9.pdb ( medoid)	1.90315	16.8142	45.5298	32
cluster_10.pdb ( medoid)	1.61203	27.2947	58.9343	44