CABS-dock: 65eacf0fbce81f3

Project name: 65eacf0fbce81f3

Status: done

submitted: 2026-01-23 12:01:04, status changed: 2026-01-23 21:44:00

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	EQAGKINVVKDTIKVGAGEVFDGHG
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCEEEECEEEECCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	29.7059	3.39999	29.5412	101
cluster_2.pdb ( medoid)	23.7673	5.8063	19.3773	138
cluster_3.pdb ( medoid)	20.5806	5.49061	32.5437	113
cluster_4.pdb ( medoid)	19.6087	5.04879	9.36672	99
cluster_5.pdb ( medoid)	16.1795	7.10775	23.7581	115
cluster_6.pdb ( medoid)	11.7649	6.71486	23.6836	79
cluster_7.pdb ( medoid)	6.77825	10.3271	24.3862	70
cluster_8.pdb ( medoid)	3.5202	8.23817	22.381	29
cluster_9.pdb ( medoid)	2.44042	11.0637	22.9809	27
cluster_10.pdb ( medoid)	2.20419	13.1568	28.1911	29