CABS-dock: 66bf60698868aeb

Project name: 66bf60698868aeb

Status: done

submitted: 2026-07-27 07:56:19, status changed: 2026-07-27 19:22:25

Project settings

Protein sequence(s)	TNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRQQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQHNGVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVILTNACSINGNAPAEIDLRQMRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRQQSLDLAEQELVDCASQHGCHGDTIPRGIEYIQHNGVVQESYYRYVAREQSCRRPNAQRFGISNYCQIYPPNANKIREALAQTHSAIAVIIGIKDLDAFRHYDGRTIIQRDNGYQPNYHAVNIVGYSNAQGVDYWIVRNSWDTNWGDNGYGYFAANIDLMMIEEYPYVVIL input pdb
Peptide sequence	WFKDYYRLEKVRGNCFWKYIPGGGG
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCEEHHHHCCCEECCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	83.5218	1.20927	9.20961	101
cluster_2.pdb ( medoid)	36.5238	1.88918	4.86295	69
cluster_3.pdb ( medoid)	26.7678	4.25885	19.6568	114
cluster_4.pdb ( medoid)	26.0493	4.14599	17.9315	108
cluster_5.pdb ( medoid)	21.3467	5.66831	15.5123	121
cluster_6.pdb ( medoid)	21.225	8.76324	15.3437	186
cluster_7.pdb ( medoid)	20.9057	5.35739	19.5755	112
cluster_8.pdb ( medoid)	10.7087	3.54851	11.2608	38
cluster_9.pdb ( medoid)	7.8819	6.47052	13.0151	51
cluster_10.pdb ( medoid)	5.50111	18.1782	46.1006	100