CABS-dock: 6992701d9188565

Project name: 6992701d9188565

Status: done

submitted: 2026-01-22 12:59:26, status changed: 2026-01-22 16:33:08

Project settings

Protein sequence(s)	GSLFQLKRETDDLEQWISSEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIIGQERVDNVNAFIERLLIDAGHSEAATTIAEWKDGLNEMWADLLLELIDDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTAFERELHLLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACA input pdb
Peptide sequence	ASSDGGVRAAKETGV
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCHHHHHHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	24.471	5.6802	29.7173	139
cluster_2.pdb ( medoid)	20.8779	6.99305	20.9311	146
cluster_3.pdb ( medoid)	17.6012	7.1018	16.0543	125
cluster_4.pdb ( medoid)	13.1285	9.21662	26.9901	121
cluster_5.pdb ( medoid)	12.8954	5.5834	16.7713	72
cluster_6.pdb ( medoid)	9.91499	5.84973	10.7045	58
cluster_7.pdb ( medoid)	9.52222	8.92649	20.2678	85
cluster_8.pdb ( medoid)	7.01126	8.55767	16.9658	60
cluster_9.pdb ( medoid)	3.18109	18.2328	39.8299	58
cluster_10.pdb ( medoid)	2.84298	15.125	29.0716	43