CABS-dock: 69a7f33c5db5ce

Project name: 69a7f33c5db5ce

Status: done

submitted: 2026-01-23 11:45:51, status changed: 2026-01-23 21:32:53

Project settings

Protein sequence(s)	ITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPN input pdb
Peptide sequence	LITVKGEGGAAVTNLNIKNSSAKGA
Simulation mc cycles	50
Peptide secondary structure psipred	CEEEECCCCEEEEECEECCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	24.1013	5.14495	26.8859	124
cluster_2.pdb ( medoid)	18.4297	4.28655	12.2385	79
cluster_3.pdb ( medoid)	17.9447	5.85132	22.0607	105
cluster_4.pdb ( medoid)	14.4279	6.23791	25.1609	90
cluster_5.pdb ( medoid)	13.3935	12.0954	35.4993	162
cluster_6.pdb ( medoid)	8.61575	12.9995	25.4853	112
cluster_7.pdb ( medoid)	8.07309	15.6074	35.729	126
cluster_8.pdb ( medoid)	5.35792	12.3182	22.4534	66
cluster_9.pdb ( medoid)	2.84219	13.37	33.3651	38
cluster_10.pdb ( medoid)	2.12089	9.90151	18.9676	21