CABS-dock: 6c57fb128b76166

Project name: 6c57fb128b76166

Status: done

submitted: 2026-03-16 04:53:37, status changed: 2026-03-16 13:10:16

Project settings

Protein sequence(s)	TCGLRQYIKGGLFADIASHPWQAAIFAKHGERFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLHPSSRCTSQHLLNRTVTDNMLCAGDTRNLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNMRP input pdb
Peptide sequence	CPGRVVGG
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	20.4318	7.97776	27.7016	163
cluster_2.pdb ( medoid)	20.4292	4.20965	24.4554	86
cluster_3.pdb ( medoid)	18.9392	9.2929	30.6935	176
cluster_4.pdb ( medoid)	14.2664	11.846	41.2634	169
cluster_5.pdb ( medoid)	10.3112	11.4439	33.2687	118
cluster_6.pdb ( medoid)	9.74973	7.17968	25.8479	70
cluster_7.pdb ( medoid)	6.79862	8.97241	24.9752	61
cluster_8.pdb ( medoid)	6.63033	7.23945	32.3059	48
cluster_9.pdb ( medoid)	5.3734	10.4217	21.6061	56
cluster_10.pdb ( medoid)	3.96115	13.38	37.4629	53