CABS-dock: ftsx-ll37

Project name: ftsx-ll37

Status: done

submitted: 2025-12-31 10:38:24, status changed: 2025-12-31 15:40:26

Project settings

Protein sequence(s)	MNTLKKHLAFIIPLVALLFSLECVLFINQAIEQKEKKLIEDYSVVLASTQKLNLELLRQNFSEIIALKEIDPNYSLEPLQKTLGIDGLKELRKNLPFFYSLQLSTFPTQERLENIKEKLLKIPGVQKVEVFAKTYMQVYDLLSFIKTAVYIFALVVFVLSVLLMFKQVRIWIYQYHERLEIMDLLGASVSFKNGFLYKIALMDSVIASFLAPMLMLYTTSQKGFEKTMDTLGIIGGAFVLNHFLWGLLFSLVVSFVSVLLVAWRTRHV input pdb
Peptide sequence	SVAGRAQGM
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	82.0071	1.20721	2.72812	99
cluster_2.pdb ( medoid)	43.8604	4.69672	18.042	206
cluster_3.pdb ( medoid)	41.2615	4.65324	23.8358	192
cluster_4.pdb ( medoid)	26.672	3.86173	29.8216	103
cluster_5.pdb ( medoid)	25.6424	2.22288	7.29561	57
cluster_6.pdb ( medoid)	22.8781	2.84114	10.9866	65
cluster_7.pdb ( medoid)	11.1479	5.4719	10.906	61
cluster_8.pdb ( medoid)	7.44528	8.59604	34.8181	64
cluster_9.pdb ( medoid)	2.91302	13.0449	32.6441	38
cluster_10.pdb ( medoid)	1.12395	14.2355	52.9087	16