CABS-dock: 6f1ae91c614ccac

Project name: 6f1ae91c614ccac

Status: done

submitted: 2026-04-14 05:27:22, status changed: 2026-04-14 13:38:13

Project settings

Protein sequence(s)	MPIEKQVVALPSGLKVHVERHVFDPAFETVILVNGALATTASFGQTIRYLGERVNAVCFDLPYAGQSRQHNPGEYILTKDDEVEILLHLAERFEPSFLLSVSWGGVASLFALARGCASVRRAVIASFSPFLNDAMTDYVTRARDHIAAGENLKAAQLLNDTVGRYLPRIMKLYNYRYLTKLPRTEQDQVAFHVDQILSMRPEQYLPEFRQIGCAVKFINGELDEYTTASDVRRLAAYVRRAEFATIRQAGHFLDLEGRQQQEQLRAAILGFFGDERASAARDDAQDETLAPLGQLPALS input pdb
Peptide sequence	DALEIYVDDEK
Simulation mc cycles	50
Peptide secondary structure psipred	CCEEEEECCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	34.5342	2.77985	36.6711	96
cluster_2.pdb ( medoid)	33.7428	4.8603	33.1204	164
cluster_3.pdb ( medoid)	17.0234	8.10647	23.3734	138
cluster_4.pdb ( medoid)	14.2185	7.17377	20.5121	102
cluster_5.pdb ( medoid)	11.7426	12.1779	35.191	143
cluster_6.pdb ( medoid)	11.072	14.6315	46.3166	162
cluster_7.pdb ( medoid)	8.24429	6.1861	15.6251	51
cluster_8.pdb ( medoid)	6.13908	11.4024	32.5068	70
cluster_9.pdb ( medoid)	3.97551	6.79158	23.9796	27
cluster_10.pdb ( medoid)	3.40741	13.7934	28.7346	47