CABS-dock: 7272b6280f903d2

Project name: 7272b6280f903d2

Status: done

submitted: 2026-01-12 17:38:18, status changed: 2026-01-13 06:55:13

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	DGIHVKAKNAQEVTIDNVHAQNVGE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCEEEEECCEECCCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	29.7981	3.75863	24.5462	112
cluster_2.pdb ( medoid)	19.195	8.6481	29.2448	166
cluster_3.pdb ( medoid)	18.6422	7.0807	27.8911	132
cluster_4.pdb ( medoid)	12.9905	7.85189	27.1961	102
cluster_5.pdb ( medoid)	10.7977	12.0396	28.3194	130
cluster_6.pdb ( medoid)	10.5917	10.9519	29.5592	116
cluster_7.pdb ( medoid)	4.51279	5.7614	20.3566	26
cluster_8.pdb ( medoid)	4.23288	10.1586	23.7878	43
cluster_9.pdb ( medoid)	3.41426	14.0587	41.113	48
cluster_10.pdb ( medoid)	2.25883	11.0677	18.4878	25