CABS-dock: 7300a52158e782a

Project name: 7300a52158e782a

Status: done

submitted: 2026-01-13 16:34:41, status changed: 2026-01-14 04:55:49

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	TVQNPQDASK
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCHHHCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	56.9913	1.80729	12.0062	103
cluster_2.pdb ( medoid)	32.2131	3.13537	12.2887	101
cluster_3.pdb ( medoid)	17.6013	6.64724	19.0634	117
cluster_4.pdb ( medoid)	13.4453	7.58627	27.5682	102
cluster_5.pdb ( medoid)	12.6935	5.35707	21.8339	68
cluster_6.pdb ( medoid)	8.43491	11.2627	20.876	95
cluster_7.pdb ( medoid)	5.96569	10.2251	31.126	61
cluster_8.pdb ( medoid)	5.65803	4.59524	15.2086	26
cluster_9.pdb ( medoid)	5.58666	12.1719	35.0172	68
cluster_10.pdb ( medoid)	4.68423	12.5954	22.9059	59