CABS-dock: 75c5a7f71f422f3

Project name: 75c5a7f71f422f3

Status: done

submitted: 2026-01-14 18:20:18, status changed: 2026-01-15 05:07:54

Project settings

Protein sequence(s)	QIIPSNTTSPPTNSTSPPTNATAPAPSPTNTITKAANITKPGCPKQCGNVTVPYPFGIGSGCALDPMFEIDCNVTTPFIGNIQIYDISDAEMRISNFINTKCYSQTGVLIQDIPSWITLGTKSPYTFSTLNRFIVVGCDDGAIVSGNNFANGCPSLCTSTNDIVKGKCMGFGCCQITIPKGLKFFNTTMVTTRNHSLIWSFNPCGHSFLGEASRFEFQGIEDLSDVNFANKIRNNVPIVLDWAIGNLSCVEARKSNDYACLNNSQCVDSDTSLGGYRCSCNSGYIGNPYIGSGCQDIDECADPNTNSCEKICTNIPGSYNCSCPEGYTGDGRKNGRGCIAPNSNSEFPWIK input pdb
Peptide sequence	SENQKPLFELAEGATLKNANLGENE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCHHHHHHCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	26.8984	2.56521	12.4202	69
cluster_2.pdb ( medoid)	24.5439	2.24089	12.6654	55
cluster_3.pdb ( medoid)	15.624	7.80851	22.7248	122
cluster_4.pdb ( medoid)	15.0959	2.18603	3.84541	33
cluster_5.pdb ( medoid)	12.6599	8.05693	38.0602	102
cluster_6.pdb ( medoid)	9.626	6.02535	19.8979	58
cluster_7.pdb ( medoid)	8.04282	16.0391	36.2839	129
cluster_8.pdb ( medoid)	7.94261	6.92467	24.067	55
cluster_9.pdb ( medoid)	4.8027	10.619	25.261	51
cluster_10.pdb ( medoid)	2.52456	10.2988	19.5189	26