CABS-dock: 793cf80febf7163

Project name: 793cf80febf7163

Status: done

submitted: 2025-12-06 18:00:58, status changed: 2025-12-06 23:22:04

Project settings

Protein sequence(s)	IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN input pdb
Peptide sequence	WIFGMHA
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in 3Dmol (WebGL)

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	48.6669	2.60957	15.6834	127
cluster_2.pdb ( medoid)	32.5918	3.71259	16.4944	121
cluster_3.pdb ( medoid)	26.7921	3.39652	15.3309	91
cluster_4.pdb ( medoid)	21.6778	6.22757	19.5356	135
cluster_5.pdb ( medoid)	16.0517	9.46942	36.7824	152
cluster_6.pdb ( medoid)	12.2653	9.04992	30.7266	111
cluster_7.pdb ( medoid)	11.2977	7.16962	24.4258	81
cluster_8.pdb ( medoid)	8.40555	9.16061	22.1934	77
cluster_9.pdb ( medoid)	5.79049	9.67103	24.9911	56
cluster_10.pdb ( medoid)	4.392	11.1567	34.0498	49