CABS-dock: 7af03c0ade8ec6

Project name: 7af03c0ade8ec6

Status: done

submitted: 2026-01-22 12:55:43, status changed: 2026-01-22 16:36:39

Project settings

Protein sequence(s)	GSLFQLKRETDDLEQWISSEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIIGQERVDNVNAFIERLLIDAGHSEAATTIAEWKDGLNEMWADLLLELIDDTRMQLLAASYDLHRYFYTGAEILGLIDEKHRELPHRVHTAFERELHLLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACA input pdb
Peptide sequence	QADLNPHSSKDLQSQSRL
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCHHHHHHHCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	31.5313	4.3766	27.4729	138
cluster_2.pdb ( medoid)	18.8307	6.00083	14.4685	113
cluster_3.pdb ( medoid)	18.7699	8.84397	43.5723	166
cluster_4.pdb ( medoid)	16.6823	9.59103	51.3037	160
cluster_5.pdb ( medoid)	15.0033	6.06535	32.7092	91
cluster_6.pdb ( medoid)	12.6497	6.16614	25.8636	78
cluster_7.pdb ( medoid)	11.5088	6.95123	47.7652	80
cluster_8.pdb ( medoid)	10.4111	3.84204	27.6441	40
cluster_9.pdb ( medoid)	10.2772	8.95184	19.7529	92
cluster_10.pdb ( medoid)	6.02997	6.96521	23.336	42