CABS-dock: 8TBP_QAIELQ

Project name: 8TBP_QAIELQ_E2

Status: done

submitted: 2026-05-30 16:16:26, status changed: 2026-05-31 07:27:38

Project settings

Protein sequence(s)	DTRPRFLWQPKRECHFFNGTERVRFLDRYFYNQEESVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEQARAAVDTYCRHNYGVGESFTVQRRVQPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFLNGQEEKAGMVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA input pdb
Peptide sequence	QAIELQLTLETIYNSQYSN
Simulation mc cycles	200
Peptide secondary structure psipred	CCEEEEEEHHHHHHCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	39.7233	2.51741	10.2596	100
cluster_2.pdb ( medoid)	25.4233	7.43411	26.9043	189
cluster_3.pdb ( medoid)	17.8486	7.05936	19.326	126
cluster_4.pdb ( medoid)	16.8913	6.27542	18.4559	106
cluster_5.pdb ( medoid)	12.2671	5.86935	22.0635	72
cluster_6.pdb ( medoid)	8.06916	6.94	22.423	56
cluster_7.pdb ( medoid)	7.84849	9.42857	24.337	74
cluster_8.pdb ( medoid)	2.57438	14.7608	48.4747	38
cluster_9.pdb ( medoid)	2.52303	8.32334	16.6098	21
cluster_10.pdb ( medoid)	1.54023	12.3358	22.7041	19