CABS-dock: 86c182579237794

Project name: 86c182579237794

Status: done

submitted: 2026-01-22 13:27:28, status changed: 2026-01-22 17:23:22

Project settings

Protein sequence(s)	EASRQQQRRFNTSSIRDFEFWLSEAETLLAMKDQQARDLASSAGNLLKKHQLLERREMLAREDALKDLNTLAEDDLLSSSGTTFNVDQIVKKKDNNVNKRFLNVQELAAAHHEKLKEAYALFQFFQDLDDEESWIEEKLIRVSSQDYGRDLQGVQNLLKKHKRLEGELVAHEEPAIQNVLDMAEKLKDKAAVGQEEIQLRLAQFVEHWEEKLKELAKARGLKLEESLEYLQFMQ input pdb
Peptide sequence	AAREEVPGRRGYPGY
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	24.4835	4.16608	26.216	102
cluster_2.pdb ( medoid)	24.4272	4.21661	22.9598	103
cluster_3.pdb ( medoid)	16.6861	4.31497	22.385	72
cluster_4.pdb ( medoid)	16.4064	6.03424	30.3949	99
cluster_5.pdb ( medoid)	16.136	1.6113	3.43098	26
cluster_6.pdb ( medoid)	9.10537	11.0924	25.4188	101
cluster_7.pdb ( medoid)	2.86441	12.9171	30.4974	37
cluster_8.pdb ( medoid)	1.64077	16.4557	30.5618	27
cluster_9.pdb ( medoid)	1.54778	15.5061	33.5699	24
cluster_10.pdb ( medoid)	1.31311	6.85393	21.1993	9