CABS-dock: 87b5cc084f30941

Project name: 87b5cc084f30941

Status: done

submitted: 2026-01-22 13:11:18, status changed: 2026-01-22 13:41:39

Project settings

Protein sequence(s)	PEITLIIFGVIAGVIGTILLISYGIRRL input pdb
Peptide sequence	EVNGDFIQKEEDTEQE
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	20.3588	6.33632	27.1507	129
cluster_2.pdb ( medoid)	15.3085	7.12024	20.3217	109
cluster_3.pdb ( medoid)	14.2458	9.68707	21.4317	138
cluster_4.pdb ( medoid)	13.54	8.56719	23.9748	116
cluster_5.pdb ( medoid)	13.1383	11.1887	28.8066	147
cluster_6.pdb ( medoid)	9.69392	11.3473	23.0515	110
cluster_7.pdb ( medoid)	8.15456	9.44257	23.9262	77
cluster_8.pdb ( medoid)	7.89049	8.61797	20.1246	68
cluster_9.pdb ( medoid)	6.28796	10.4963	21.6476	66
cluster_10.pdb ( medoid)	4.6601	8.5835	23.8302	40