CABS-dock: 8a9ac536d5d48d8

Project name: 8a9ac536d5d48d8

Status: done

submitted: 2026-07-15 11:13:40, status changed: 2026-07-15 15:15:03

Project settings

Protein sequence(s)	KLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE input pdb
Peptide sequence	CYICYWGNGPDCLEIRC
Simulation mc cycles	50
Peptide secondary structure psipred	CEEEEECCCCCEEEECC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	46.2384	3.13592	13.3079	145
cluster_2.pdb ( medoid)	21.1044	6.39677	13.7906	135
cluster_3.pdb ( medoid)	18.0448	6.48387	21.3373	117
cluster_4.pdb ( medoid)	14.8238	7.01576	18.9735	104
cluster_5.pdb ( medoid)	14.1098	9.21344	17.0042	130
cluster_6.pdb ( medoid)	13.5801	9.72014	20.8866	132
cluster_7.pdb ( medoid)	10.9342	7.3165	21.6706	80
cluster_8.pdb ( medoid)	6.93323	6.92318	14.0639	48
cluster_9.pdb ( medoid)	6.29472	9.05521	29.5965	57
cluster_10.pdb ( medoid)	5.03716	10.3233	34.6912	52