CABS-dock: 8bf91b251414a6f

Project name: 8bf91b251414a6f

Status: done

submitted: 2026-01-21 23:11:29, status changed: 2026-01-22 01:38:13

Project settings

Protein sequence(s)	RECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTIELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLP input pdb
Peptide sequence	SEAAKLRELNDATLARQRAS
Simulation mc cycles	50
Peptide secondary structure psipred	CHHHHHHHHHHHHHHHHHCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	33.7947	5.03038	28.1029	170
cluster_2.pdb ( medoid)	23.1317	7.13308	27.2635	165
cluster_3.pdb ( medoid)	22.5666	6.15955	21.376	139
cluster_4.pdb ( medoid)	18.7589	5.54403	21.9718	104
cluster_5.pdb ( medoid)	15.9138	9.80282	31.8614	156
cluster_6.pdb ( medoid)	11.9425	6.11262	22.4741	73
cluster_7.pdb ( medoid)	6.31913	9.17848	21.718	58
cluster_8.pdb ( medoid)	4.99852	4.80142	14.1247	24
cluster_9.pdb ( medoid)	4.92127	10.9728	26.4027	54
cluster_10.pdb ( medoid)	4.20978	13.5399	30.8137	57