CABS-dock: 8e3a20d571de77d

Project name: 8e3a20d571de77d

Status: done

submitted: 2026-02-19 20:24:31, status changed: 2026-02-20 09:52:08

Project settings

Protein sequence(s)	TVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQKDNSSLPWRDLSECEESSPEEQLLFLYIIYTVGYALSFSALVIASAILLGFRHLHCTRNYIHLNLFASFILRALCVFFKDAALKWMYSTAAQQHQWDGLLSYQDSLACRLVFLLCQYCVAANYYWLLVEGVYLYTLLAFMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEQWIFRLYVAIGWGVPLLFVVPWGIVKYLYEDEGCWTRNSNMNYWLIIRLPILFACIVNFLIFVRVICIVVSKLKANLMCKTDIAFRLAKSTLTLIPLLCTHEVIFAFVMDEHARGTLRFIKLFTDLSFTSFQGLMVAILYCFVNNEVQLEFRKSWERWR input pdb
Peptide sequence	YRAPQYQMYDDVQFVKRSNA
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCHHHHHHCCC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	187.25	0.534045	1.25905	100
cluster_2.pdb ( medoid)	52.1379	1.93717	19.3764	101
cluster_3.pdb ( medoid)	30.4245	3.3197	25.833	101
cluster_4.pdb ( medoid)	30.2224	3.3088	7.99684	100
cluster_5.pdb ( medoid)	21.0161	8.61246	44.5989	181
cluster_6.pdb ( medoid)	9.63873	12.4498	29.4834	120
cluster_7.pdb ( medoid)	7.35075	6.39391	27.8376	47
cluster_8.pdb ( medoid)	4.71089	23.5624	58.9269	111
cluster_9.pdb ( medoid)	3.31702	22.6106	62.3786	75
cluster_10.pdb ( medoid)	3.25224	15.6815	30.9799	51