CABS-dock: 90aaa550d343f45

Project name: 90aaa550d343f45

Status: done

submitted: 2026-07-15 21:57:45, status changed: 2026-07-16 00:57:37

Project settings

Protein sequence(s)	FKIETTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISP input pdb
Peptide sequence	VHPKQHR
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	26.1386	4.32311	30.3598	113
cluster_2.pdb ( medoid)	23.8704	5.11092	28.2224	122
cluster_3.pdb ( medoid)	19.0531	7.13793	30.8795	136
cluster_4.pdb ( medoid)	18.2789	3.66543	14.7253	67
cluster_5.pdb ( medoid)	15.4963	4.25908	12.4552	66
cluster_6.pdb ( medoid)	13.5781	6.11278	28.0212	83
cluster_7.pdb ( medoid)	10.5651	4.73257	10.5781	50
cluster_8.pdb ( medoid)	5.99159	4.00562	12.5381	24
cluster_9.pdb ( medoid)	3.48051	5.45897	11.2744	19
cluster_10.pdb ( medoid)	2.05689	9.72342	31.8781	20