Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | GADFQECMKEHSQKQHQHQG |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCHHHHHHHHHHHHHHHHCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 41.9769 | 2.81107 | 10.076 | 118 |
cluster_2.pdb ( medoid) | 25.4132 | 3.81691 | 13.2561 | 97 |
cluster_3.pdb ( medoid) | 24.7317 | 6.06509 | 15.2294 | 150 |
cluster_4.pdb ( medoid) | 24.5081 | 6.97728 | 22.0084 | 171 |
cluster_5.pdb ( medoid) | 20.415 | 7.29855 | 18.9252 | 149 |
cluster_6.pdb ( medoid) | 12.9209 | 7.97157 | 15.5597 | 103 |
cluster_7.pdb ( medoid) | 9.91082 | 10.09 | 22.1037 | 100 |
cluster_8.pdb ( medoid) | 8.86261 | 6.43151 | 20.9572 | 57 |
cluster_9.pdb ( medoid) | 3.12482 | 9.92057 | 19.3783 | 31 |
cluster_10.pdb ( medoid) | 1.9595 | 12.248 | 22.549 | 24 |