CABS-dock: 91bffea30db5cd1

Project name: 91bffea30db5cd1

Status: done

submitted: 2026-06-12 08:20:55, status changed: 2026-06-12 17:03:20

Project settings

Protein sequence(s)	MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFEDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSIPEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNFERGGDITLRCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASVDGNRSRSRTLSQSSESGTLSSGPPGHTMEVSC input pdb
Peptide sequence	MEKGRLLHSAAVT
Simulation mc cycles	50
Peptide secondary structure psipred	CCCCCCCCCCCCC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	23.4921	6.6831	18.3379	157
cluster_2.pdb ( medoid)	22.0684	8.97212	34.3121	198
cluster_3.pdb ( medoid)	13.658	10.6165	28.8811	145
cluster_4.pdb ( medoid)	12.0812	3.39371	12.7283	41
cluster_5.pdb ( medoid)	10.4581	9.17948	38.195	96
cluster_6.pdb ( medoid)	10.2733	6.71644	14.4105	69
cluster_7.pdb ( medoid)	8.82926	11.6658	33.4082	103
cluster_8.pdb ( medoid)	6.80185	10.8794	27.5208	74
cluster_9.pdb ( medoid)	5.94782	14.1228	39.218	84
cluster_10.pdb ( medoid)	5.75159	5.73754	18.3802	33