| Protein sequence(s) | AQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDV input pdb | |||||||||
| Peptide sequence | TEYSDKGRSDW | |||||||||
| Simulation mc cycles | 50 | |||||||||
| Peptide secondary structure psipred | CCCCCCCCCCC | |||||||||
Unlikely to bind regions |
|
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| cluster name | cluster density | average rmsd | max rmsd | number of elements |
| cluster_1.pdb ( medoid) | 77.0061 | 1.31158 | 8.26589 | 101 |
| cluster_2.pdb ( medoid) | 56.4083 | 4.64471 | 23.2576 | 262 |
| cluster_3.pdb ( medoid) | 31.4861 | 3.55713 | 12.2003 | 112 |
| cluster_4.pdb ( medoid) | 29.4732 | 5.53045 | 14.0827 | 163 |
| cluster_5.pdb ( medoid) | 19.8218 | 2.11888 | 9.86679 | 42 |
| cluster_6.pdb ( medoid) | 15.4053 | 5.38776 | 13.7739 | 83 |
| cluster_7.pdb ( medoid) | 9.45876 | 5.2861 | 13.2326 | 50 |
| cluster_8.pdb ( medoid) | 8.35372 | 3.3518 | 9.37729 | 28 |
| cluster_9.pdb ( medoid) | 7.65686 | 15.5416 | 37.0942 | 119 |
| cluster_10.pdb ( medoid) | 3.32016 | 12.0476 | 30.6411 | 40 |
