CABS-dock: 99e323319a5e655

Project name: 99e323319a5e655

Status: done

submitted: 2026-03-08 18:46:23, status changed: 2026-03-09 07:50:40

Project settings

Protein sequence(s)	MIKEEHVIIQAEFYLNPDQSGEFMFDFDGDEIFHVDMAKKETVWRLEEFGRFASFEAQGALANIAVDKANLEIMTKRSNYTPITNVPPEVTVLTNSPVELREPNVLICFIDKFTPPVVNVTWLRNGKPVTTGVSETVFLPREDHLFRKFHYLPFLPSTEDVYDCRVEHWGLDEPLLKHWEFDAPSMGDTRPRFLWQLKFECHFFNGTERVRLLERCIYNQEESVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRAAVDTYCRHNYGVGESFTVQRRVEPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRWFRNGQEEKAGVVSTGLIQNGDWTFQTTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWRA input pdb
Peptide sequence	GSHAHLHHVAAAAAAAA
Simulation mc cycles	50
Peptide secondary structure psipred	CCCHHHHHHHHHHHHHC

Re-submit project

Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

Download all files

Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	40.6439	2.97707	8.76449	121
cluster_2.pdb ( medoid)	39.0175	2.71673	24.3741	106
cluster_3.pdb ( medoid)	28.1045	4.55444	25.9236	128
cluster_4.pdb ( medoid)	24.0696	5.0271	35.8647	121
cluster_5.pdb ( medoid)	14.77	7.58294	28.6024	112
cluster_6.pdb ( medoid)	14.5526	5.77217	10.8619	84
cluster_7.pdb ( medoid)	11.9519	6.60982	13.745	79
cluster_8.pdb ( medoid)	5.80842	13.9453	40.6296	81
cluster_9.pdb ( medoid)	4.02177	15.6647	37.2987	63
cluster_10.pdb ( medoid)	3.53155	29.732	65.1487	105