Protein sequence(s) | KQNSNSYPGQYKGKGGYQ input pdb |
Peptide sequence | KTFQGPPHGIQVERD |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCCCCCCCEEECC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 39.9643 | 2.77748 | 21.8816 | 111 |
cluster_2.pdb ( medoid) | 28.0571 | 6.98575 | 16.4788 | 196 |
cluster_3.pdb ( medoid) | 18.6913 | 5.5106 | 19.5239 | 103 |
cluster_4.pdb ( medoid) | 15.8491 | 9.65352 | 20.7795 | 153 |
cluster_5.pdb ( medoid) | 15.7474 | 8.19185 | 25.0015 | 129 |
cluster_6.pdb ( medoid) | 15.2494 | 3.40997 | 12.5864 | 52 |
cluster_7.pdb ( medoid) | 10.5612 | 6.62803 | 16.538 | 70 |
cluster_8.pdb ( medoid) | 8.43919 | 10.0721 | 17.9087 | 85 |
cluster_9.pdb ( medoid) | 5.67325 | 10.9285 | 23.2216 | 62 |
cluster_10.pdb ( medoid) | 5.10826 | 7.6347 | 19.5151 | 39 |