| Protein sequence(s) | AQIDLNITCRFAGVFHVEKNGRYSISRTEAADLCKAFNSTLPTMAQMEKALSIGFETCRYGFIEGHVVIPRIHPNSICAANNTGVYILTSNTSQYDTYCFNASAPPEEDCTSVTDLPNAFDGPITITIVNRDGTRYVQKGEYRTNPEDIYPSNPTDDDV input pdb | |||||||||
| Peptide sequence | WDSRGKDSYETSQL | |||||||||
| Simulation mc cycles | 50 | |||||||||
| Peptide secondary structure psipred | CCCCCCCCCCCCCC | |||||||||
Unlikely to bind regions |
|
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| Receptor residue | Peptide residue |
| cluster name | cluster density | average rmsd | max rmsd | number of elements |
| cluster_1.pdb ( medoid) | 6.82634 | 6.44562 | 13.3269 | 44 |
| cluster_2.pdb ( medoid) | 4.83628 | 9.71822 | 20.3715 | 47 |
| cluster_3.pdb ( medoid) | 4.25551 | 10.8095 | 22.4046 | 46 |
| cluster_4.pdb ( medoid) | 3.99322 | 6.76145 | 17.0396 | 27 |
| cluster_5.pdb ( medoid) | 3.33028 | 9.30854 | 25.3489 | 31 |
| cluster_6.pdb ( medoid) | 2.86173 | 9.08541 | 20.9808 | 26 |
| cluster_7.pdb ( medoid) | 2.41827 | 11.5785 | 24.0172 | 28 |
| cluster_8.pdb ( medoid) | 1.61333 | 11.157 | 23.0218 | 18 |
| cluster_9.pdb ( medoid) | 1.07279 | 15.8465 | 28.1248 | 17 |
| cluster_10.pdb ( medoid) | 0.924005 | 19.4804 | 35.2867 | 18 |
