Protein sequence(s) | SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMVLPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ input pdb |
Peptide sequence | ITCPQVTQSLAPCVPYLISG |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCCCHHHHCCCCCCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 26.8939 | 6.1724 | 29.4526 | 166 |
cluster_2.pdb ( medoid) | 24.4034 | 4.09779 | 6.98037 | 100 |
cluster_3.pdb ( medoid) | 20.3775 | 4.95645 | 20.0575 | 101 |
cluster_4.pdb ( medoid) | 17.1118 | 6.42832 | 19.0994 | 110 |
cluster_5.pdb ( medoid) | 16.2769 | 0.982987 | 2.76833 | 16 |
cluster_6.pdb ( medoid) | 13.2808 | 13.7793 | 28.1013 | 183 |
cluster_7.pdb ( medoid) | 12.8935 | 3.87794 | 19.3136 | 50 |
cluster_8.pdb ( medoid) | 11.815 | 13.3728 | 31.4222 | 158 |
cluster_9.pdb ( medoid) | 10.7946 | 4.44668 | 16.5069 | 48 |
cluster_10.pdb ( medoid) | 5.92396 | 11.4788 | 26.8316 | 68 |