Protein sequence(s) | LDINVDDKDSICSAAKYVVQGIWNYYEGLKYGGTVGMFAPPNYWWNAGEAFGGLVDFYTYCQSDNSTLEKLIYNGMYHQAGENYNYIPSNQSMTEGNDDQGVWGMAIMEAVERNFTEPESHSWLEMVQAVFNTMNARWDADNCGGGLRWQIFTWNSGYDYKNSISNGCLFHLAARLARYTGNSSVYVDTAEKVWKWMEDVGFLTEEDNGDVRIYDGAKITNNCSSVTDLRWSYTYGVFMAGCAYLYNFTGDDVWLTRTNEIVQASLSYFFANKIMQETTCQPQNKCNNDQRSFRCLFSRCLGLTTQLAPETKDRIREVLEASAEGAAKSCSGGSDGVTCGENWAIDKWDGVYGLGEQTSALEVMMALIVEPPLSVKTGGTNRTDYSAGTNSEDNANKNE input pdb |
Peptide sequence | KNQDDCVAINKA |
Simulation mc cycles | 50 |
Peptide secondary structure psipred | CCHHHCCCCCCC |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 69.55 | 1.76851 | 9.10294 | 123 |
cluster_2.pdb ( medoid) | 34.6264 | 3.55221 | 7.40376 | 123 |
cluster_3.pdb ( medoid) | 33.9151 | 6.07399 | 14.8518 | 206 |
cluster_4.pdb ( medoid) | 29.0812 | 3.61058 | 10.6855 | 105 |
cluster_5.pdb ( medoid) | 22.6366 | 2.42969 | 5.38697 | 55 |
cluster_6.pdb ( medoid) | 22.2738 | 2.73864 | 7.06344 | 61 |
cluster_7.pdb ( medoid) | 18.4292 | 3.96111 | 8.6182 | 73 |
cluster_8.pdb ( medoid) | 14.4444 | 7.13081 | 43.2397 | 103 |
cluster_9.pdb ( medoid) | 13.599 | 7.57406 | 28.8434 | 103 |
cluster_10.pdb ( medoid) | 5.06723 | 9.47264 | 28.3132 | 48 |