Project name: 9_SRC_RUTU

Status: done

submitted: 2023-11-27 16:05:47, status changed: 2023-11-28 02:54:38

Project settings
Peptide sequence RLLYRLLLGY
Simulation mc cycles50
Peptide secondary structure psipred CHHHHHHHCC
Contact information
273:A 295:A 340:A 341:A 404:A
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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.
Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).
Representative conformations
model_1 Download
model_2 Download
model_3 Download
model_4 Download
model_5 Download
model_6 Download
model_7 Download
model_8 Download
model_9 Download
model_10 Download

Download all files
Click the "View" button to load the contact map of appropriate model.
Representative conformations
model_1 View
model_2 View
model_3 View
model_4 View
model_5 View
model_6 View
model_7 View
model_8 View
model_9 View
model_10 View

Receptor residuePeptide residue
Receptor residuePeptide residue
Receptor residuePeptide residue
Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.
replica_1 Download
replica_2 Download
replica_3 Download
replica_4 Download
replica_5 Download
replica_6 Download
replica_7 Download
replica_8 Download
replica_9 Download
replica_10 Download
Selected model: model_1.pdb (most representative model of the best cluster) download the model
Details about clusters
cluster namecluster density average rmsdmax rmsdnumber of elements
cluster_1.pdb ( medoid) 75.15 1.35728 6.88208 102
cluster_2.pdb ( medoid) 56.5772 2.15634 10.5724 122
cluster_3.pdb ( medoid) 50.915 2.19974 10.2741 112
cluster_4.pdb ( medoid) 24.6576 5.06942 27.0004 125
cluster_5.pdb ( medoid) 15.9069 6.97812 27.6104 111
cluster_6.pdb ( medoid) 14.5962 6.30301 16.6895 92
cluster_7.pdb ( medoid) 10.1022 12.4725 43.4768 126
cluster_8.pdb ( medoid) 8.66193 11.1984 35.0537 97
cluster_9.pdb ( medoid) 7.97957 10.7775 39.732 86
cluster_10.pdb ( medoid) 4.07372 6.62785 11.836 27