CABS-dock: a81553413367ad2

Project name: a81553413367ad2

Status: done

submitted: 2026-03-09 02:48:00, status changed: 2026-03-09 14:40:06

Project settings

Protein sequence(s)	IKADHVSTYAAFVQTHRPTGEFMFEFDEDEMFYVDLDKKETVWHLEEFGQAFSFEAQGGLANIAILNNNLNTLIQRSNHTQATNDPPEVTVFPKEPVELGQPNTLICHIDKFFPPVLNVTWLCNGELVTEGVAESLFLPRTDYSFHKFHYLTFVPSAEDFYDCRVEHWGLDQPLLKHWEAQTPENYLFQGRQECYAFNGTQRFLERYIYNREEFARFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVPDRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFLNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKA input pdb
Peptide sequence	KEIFRKNFFKDWRKEM
Simulation mc cycles	50
Peptide secondary structure psipred	CHHHHHHHHHHHHHHC

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Zoom/rotate predicted model of the complex using mouse. Click the "View" button on the right panel to load the appropriate model. View in JSmol (pure html5/js) if you got rendering problems.

Models are ranked and numbered according to their occurrence in docking trajectory (1 = most probable result).

Representative conformations

	model_1		Download
	model_2		Download
	model_3		Download
	model_4		Download
	model_5		Download
	model_6		Download
	model_7		Download
	model_8		Download
	model_9		Download
	model_10		Download

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Click the "View" button to load the contact map of appropriate model.

Representative conformations

Contact cutoff (Å)

	model_1	View
	model_2	View
	model_3	View
	model_4	View
	model_5	View
	model_6	View
	model_7	View
	model_8	View
	model_9	View
	model_10	View

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Receptor residue	Peptide residue

Select trajectory from the right panel to display animation in JSmol. Note that it may hangs browser window for few minutes or ever.

Trajectories

	replica_1		Download
	replica_2		Download
	replica_3		Download
	replica_4		Download
	replica_5		Download
	replica_6		Download
	replica_7		Download
	replica_8		Download
	replica_9		Download
	replica_10		Download

Selected model: model_1.pdb (most representative model of the best cluster) download the model

Details about clusters

cluster name	cluster density	average rmsd	max rmsd	number of elements
cluster_1.pdb ( medoid)	74.0905	1.21473	8.30851	90
cluster_2.pdb ( medoid)	51.5615	2.3855	11.2826	123
cluster_3.pdb ( medoid)	45.229	2.40996	14.1629	109
cluster_4.pdb ( medoid)	36.6609	2.70043	7.2453	99
cluster_5.pdb ( medoid)	32.5484	3.84043	8.89388	125
cluster_6.pdb ( medoid)	13.5412	13.9574	35.2275	189
cluster_7.pdb ( medoid)	12.0212	7.32041	20.3321	88
cluster_8.pdb ( medoid)	10.7673	9.10163	22.0336	98
cluster_9.pdb ( medoid)	4.60397	11.2946	34.1693	52
cluster_10.pdb ( medoid)	3.45343	7.81831	19.2844	27