Protein sequence(s) | MHTLLFLLLLAGTQSATARTHSLQYFHTGSSQVPNFPEFVSVGYVDEVQINHYDSNTMKVEPKQDWMLKTTDSQYWEKNTKYFLSERQIFKVNIEIAKERFNQTEGVHIIQRMYGCEWDDETGEVKGYDQHGYDGEDFISLDLETETWIAPTPQAVITKLKWDNNKALLANQKNYYTQVCPDWLKKYLEHGKSSLLRTELPSMSLLQKSPSSPVSCHATGFYPDSAMLFWRKDGEEHHEDVYVGEVLPNHDGTFQMSADLQVSSIPPEDWRRYDCVFQLSGVKEDIVKRLDKDSVESNREKPTDVTTIIIVAAVVVLALVLAVTGFIVYRKRNAKCPPSPGKDPNVLKPLNPDGQVSNSPSETSSMKNTMKNKVDTCPVFLFVSVLGLLSMFPVLSAERHSLTYIYTAFSKPVQSPGLHEFTAMGMVDQKMIDYFDSDLNLKVPKEPWMEQNMGKDYWKMGTESRQSKQKWFNVNIDILMKRLRQNDTDTHVLQWLHGCETSRSTASMKFYRGVDTYSYDGNDFLHFDDGHGVWVSSGAAADDTKRKWDGVQTLKDYTKGYLENECLKWLEKFVTYRQKQLQAAPSPSMFMFAKKSHTETSVILTCLATGFLQRQVELEMRRDGRLLTAQDGVRTSNVRPNDADSYQIRNSVEILKTDKSLFTCEVLHRESSLSVATTWDRKLPNAASGLTYVGVGVGLVVLVVLGVQPL input pdb | |
Peptide sequence | SVYDSGMLV | |
Simulation mc cycles | 50 | |
Peptide secondary structure psipred | CCCCCCCCC | |
Flexible regions |
|
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
Receptor residue | Peptide residue |
cluster name | cluster density | average rmsd | max rmsd | number of elements |
cluster_1.pdb ( medoid) | 54.8621 | 1.82275 | 3.69251 | 100 |
cluster_2.pdb ( medoid) | 53.2421 | 2.4229 | 6.99743 | 129 |
cluster_3.pdb ( medoid) | 38.3093 | 3.65446 | 9.78368 | 140 |
cluster_4.pdb ( medoid) | 34.1059 | 3.31321 | 9.38932 | 113 |
cluster_5.pdb ( medoid) | 22.9563 | 4.09473 | 8.15982 | 94 |
cluster_6.pdb ( medoid) | 18.9044 | 4.07313 | 7.56273 | 77 |
cluster_7.pdb ( medoid) | 18.03 | 6.98834 | 13.8814 | 126 |
cluster_8.pdb ( medoid) | 14.453 | 7.40333 | 19.1692 | 107 |
cluster_9.pdb ( medoid) | 8.90701 | 6.51172 | 10.7261 | 58 |
cluster_10.pdb ( medoid) | 8.80364 | 6.361 | 13.3796 | 56 |